BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB038B06SP1|AL430492
(600 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1698 1173 0.0
>3x_Contig1698
Length = 21001
Score = 1173 bits (590), Expect = 0.0
Identities = 596/600 (99%)
Strand = Plus / Plus
Query: 1 ggcaagtacgaaaaagaagcatttaakagcattgcctttkaattatcccatcccttttcg 60
||||||||||||||| |||||||||| |||||||||||| ||||||||||||||||||||
Sbjct: 14142 ggcaagtacgaaaaataagcatttaagagcattgcctttgaattatcccatcccttttcg 14201
Query: 61 ttgtacaagtccagcactttatccaatttcttcaatgaaaataccaacaattgacttccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14202 ttgtacaagtccagcactttatccaatttcttcaatgaaaataccaacaattgacttccc 14261
Query: 121 atctgtctgattagatttactttgttttgcagacatttcgtaagagctgttttcgttaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14262 atctgtctgattagatttactttgttttgcagacatttcgtaagagctgttttcgttaaa 14321
Query: 181 gtagaaggaataatcgactccacgacaattgttgtggatggaagactatcagaatctact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14322 gtagaaggaataatcgactccacgacaattgttgtggatggaagactatcagaatctact 14381
Query: 241 gtttcgacgtattctggaatgggaagattgatcattctacccaaaaacaatgtcatacca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14382 gtttcgacgtattctggaatgggaagattgatcattctacccaaaaacaatgtcatacca 14441
Query: 301 aaccaataagctgtcatctttgggtcatgtgatcccatagatgacacgtacgttgagtaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14442 aaccaataagctgtcatctttgggtcatgtgatcccatagatgacacgtacgttgagtaa 14501
Query: 361 ggagccaccaactctgggacgttacctaaaatttttatgactgtattacattgtgtatca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14502 ggagccaccaactctgggacgttacctaaaatttttatgactgtattacattgtgtatca 14561
Query: 421 tcttcccatggcttaaaaaatgttaatgtggtgtataataacttgttgtgtaacttgaat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14562 tcttcccatggcttaaaaaatgttaatgtggtgtataataacttgttgtgtaacttgaat 14621
Query: 481 accttctggttaattaccacaggaacgcctgacttcaagtttgaactatcctcaaaccaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14622 accttctggttaattaccacaggaacgcctgacttcaagtttgaactatcctcaaaccaa 14681
Query: 541 gaagttttgtcggtaaatacgacaccaaagtccgtrtcgccaccatagatttgaaagaat 600
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 14682 gaagttttgtcggtaaatacgacaccaaagtccgtatcgccaccatagatttgaaagaat 14741
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4494
Number of Sequences: 1807
Number of extensions: 4494
Number of successful extensions: 76
Number of sequences better than 1.0e-20: 1
length of query: 600
length of database: 10,358,551
effective HSP length: 16
effective length of query: 584
effective length of database: 10,329,639
effective search space: 6032509176
effective search space used: 6032509176
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)